Table 1

The result of the alignment, clustering and annotation of the reads
Classes of reads Raw reads Read clusters
Necrotic Unaffected
Raw reads 15034867 12544524
Filtered reads 11997185 9452155
Aligned reads 10506718 7305262
Uniquely aligned reads 7862371 5634264 394631
Clusters with > = 5 reads 7412475 5568204 26465

Clustering of raw reads is obtained after the alignment to the reference genome.

Podolska et al.

Podolska et al. BMC Genomics 2012 13:459   doi:10.1186/1471-2164-13-459

Open Data