Figure 5.

Distance between motifs 12–0 and 12–5 in all four orientations. Histogram of the distance between motifs 12–0 and 12–5 for all upstream regions that contained both motifs. Blue bars: Distribution of the inter-motif distance for motif pairs in the 12–0 ⇛ 12–5 orientation. The 17 pairs in this category among RPG upstream regions are indicated by the dark blue portion of each bar. Red bars: Distribution of the inter-motif distance for motif pairs in the R12-5 ⇛ 12–0 orientation. The five pairs in this category among RPG upstream regions are indicated in dark red. Grey bars: Distribution of the inter-motif distance for motif pairs in the 12–5 ⇛ 12–0 orientation. Brown bars: Distribution of the inter-motif distance for motif pairs in the 12–0 ⇛ R12-5 orientation. “R” indicates the remaining motif pairs in each category with distances greater than 43 bp.

Sleumer et al. BMC Genomics 2012 13:433   doi:10.1186/1471-2164-13-433
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