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Open Access Highly Accessed Research article

Detecting transcription of ribosomal protein pseudogenes in diverse human tissues from RNA-seq data

Peter Tonner1, Vinodh Srinivasasainagendra2, Shaojie Zhang1* and Degui Zhi2*

Author Affiliations

1 Department of Electrical Engineering and Computer Science, University of Central Florida, Orlando, FL, 32816, USA

2 Department of Biostatistics, Section on Statistical Genetics, University of Alabama at Birmingham, Birmingham, AL, 35294, USA

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BMC Genomics 2012, 13:412  doi:10.1186/1471-2164-13-412

Published: 21 August 2012

Additional files

Additional file 1:

Table S1. RPKM expression values of RP pseudogenes in all 16 tissues.

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Additional file 2:

Figure S1-S4. Comparison of read coverage with or without uniqueome filtering for four RP pseudogenes.

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Additional file 3:

Table S2. RPKM expression values of RP genes in all 16 tissues.

Format: XLS Size: 70KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data