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Open Access Database

HTRIdb: an open-access database for experimentally verified human transcriptional regulation interactions

Luiz A Bovolenta*, Marcio L Acencio and Ney Lemke

Author Affiliations

Departamento de Física e Biofísica, Instituto de Biociências de Botucatu, Unesp - Univ Estadual Paulista, Distrito de Rubião Jr. s/n, Botucatu, São Paulo, 18618-970, Brazil

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BMC Genomics 2012, 13:405  doi:10.1186/1471-2164-13-405

Published: 17 August 2012

Additional files

Additional file 1:

Details about the search strategy used to collect the TF-TG interactions. This file includes (1) the Boolean query used in Pubmed search to retrieve articles that probably have human TF-TG interactions detected by small and mid-scale techniques, (2) the list of Pubmed IDs for articles retrieved after the search, (3) the list of gene official and alias symbols for human genes, (4) the list of gene official and alias names for human genes and (5) the list of Gene Expression Omnibus (GEO) Series records for the ChIP-chip experiments.

Format: TXT Size: 5MB Download file

Open Data