Table 7

Comparisons between public ESTs and assembled transcripts
Trinity Trans-ABySS
AFSFASSS AFSF + ASSS AF + SF + AS + SS AFSFASSS AFSF + ASSS AF + SF + AS + SS
% of ESTs hita 87.83% 88.89% 88.86% 88.64% 87.91% 87.29%
(% of bases covered) 77.76% 79.76% 80.04% 80.49% 79.50% 78.61%
% of assembled transcripts hitb 59.54% 65.43% 69.82% 78.05% 80.58% 80.78%
(% of bases covered) 57.09% 62.59% 66.09% 70.91% 74.24% 75.90%

a Proportion of public ESTs matched by assembled transcripts.

b Proportion of assembled transcripts matched by public ESTs.

Duan et al.

Duan et al. BMC Genomics 2012 13:392   doi:10.1186/1471-2164-13-392

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