Table 1

Statistics of trimmed reads
Libraries Total reads Total nucleotides (nt) Average length GC percentage
AF 33,067,246 (1.5%) 2,426,965,166 (23.3%) 73.4 39.15% (52.7%)
AS 80,879,822 (4.6%) 6,204,420,998 (18.7%) 76.7 40.03% (50.8%)
SF 32,678,050 (1.3%) 2,410,831,266 (22.8%) 73.8 38.95% (51.9%)
SS 65,967,360 (4.5%) 5,148,749,102 (17.1%) 78.0 40.48% (50.3%)

The numbers in the parentheses indicated the trimmed proportions of reads, bases and the GC content before trimming.

Duan et al.

Duan et al. BMC Genomics 2012 13:392   doi:10.1186/1471-2164-13-392

Open Data