Table 3

COG annotations of putative proteins in Cavendish bananas following inoculation with Fusarium oxysporum f. sp. cubense tropical race 4.
COG function classification Number of unigenes Percentage
General function prediction only 6577 13.05%
Translation, ribosomal structure, and biogenesis 5585 11.08%
Transcription 4649 9.22%
Posttranslational modification, protein turnover, chaperones 4266 8.46%
Replication, recombination and repair 3278 6.5%
Signal transduction mechanisms 3196 6.34%
Carbohydrate transport and metabolism 2913 5.78%
Function unknown 2825 5.60%
Cell cycle control, cell division, chromosome partitioning 2522 5.00%
Cell wall/membrane/envelope biogenesis 2359 4.68%
Amino acid transport and metabolism 1858 3.69%
Energy production and conversion 1598 3.17%
Intracellular trafficking, secretion, and vesicular transport 1434 2.84%
Inorganic ion transport and metabolism 1271 2.52%
Lipid transport and metabolism 1252 2.48%
Secondary metabolites biosynthesis, transport and catabolism 1167 2.32%
Cytoskeleton 879 1.74%
Coenzyme transport and metabolism 718 1.42%
Cell motility 434 0.86%
Nucleotide transport and metabolism 427 0.85%
Chromatin structure and dynamics 426 0.085%
Defense mechanisms 404 0.80%
RNA processing and modification 348 0.69%
Nuclear structure 13 0.03%
Extracellular structures 11 0.02%
Total 50,410 100%

Li et al.

Li et al. BMC Genomics 2012 13:374   doi:10.1186/1471-2164-13-374

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