Additional file 5.
Horizontal gene transfer events between O. oeni and Lactococcus spp. A representative protein (query_id) for each pan_genome locus was used in homology searches against the combined predicted protein sequences from each Lactococcus spp. genome (seq_id) available in Genbank. Average identity values were calculated using a 10 ORF sliding window (average(n = 10)). Regions in which >5 adjacent ORFs displayed >90% amino acid identity between an O. oeni protein and a protein from Lactococcus spp. are also indicated (window n = 5; identity > = 90).
Format: XLS Size: 973KB Download file
This file can be viewed with: Microsoft Excel Viewer
Borneman et al. BMC Genomics 2012 13:373 doi:10.1186/1471-2164-13-373