Table 6

Novel baboon miRNAs categorized by diet and LDL-C. The numbers of predicted target genes, and the 2-7mer seed region for each novel miRNA, are shown
Chow diet
High LDL-C Low LDL-C
‘Seed’ No. of targets ‘Seed’ No. of targets
GGGTGCG 37 ACCTCGA 6
TAAGAAC 423 TGGAATA 315
TGGACGT 8 TTATAAT 826
TTGACTA 111
Total unique targets 561 Total unique targets 1079
HCHF diet
High LDL-C Low LDL-C
‘Seed’ No. of targets ‘Seed’ No. of targets
CCCAAAT 306 TTCTGAT 441
CCCGCGG 6 TGGACGT 8
AGAGCTT 575 GCGCTGG 15
TTTTGCT 149
ACCTCGA 6
CTACCCC 59
CTGTGAG 14
Total unique targets 902 Total unique targets 416
Both diets
High LDL-C Low LDL-C
‘Seed’ No. of targets ‘Seed’ No. of targets
ATCAAGG 147 ATCAAGG 147
CCGCCCT 14 CCGCCCT 14
TTTTTGC 349 CAGGCAC 402
CAGGCAC 402
TTGTTGC 179
Total unique targets 985 Total unique targets 552

Karere et al.

Karere et al. BMC Genomics 2012 13:320   doi:10.1186/1471-2164-13-320

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