Additonal file 7 .
Figure S5. RIPCAL analysis of VdLs.17 Class II TEs. Search of the indicated DNA transposon sequences for evidence of RIP mutations by RIPCAL analyses did not show any clear bias in the type of mutations observed. Analysis of VdLTRE2-like sequences, in which a bias for CA to TA transition mutation was previously identified  was included in our study as a positive control of RIPing.
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Amyotte et al. BMC Genomics 2012 13:314 doi:10.1186/1471-2164-13-314