|Analysis of degradome reads from five different libraries matched to the soybean genome|
|Library namea||Raw Reads||20-21 nt reads||Genome matched readsb||Transcriptome matched Readsb|
aCot25 and SC25 are libraries from cotyledons and seed coats dissected from early-maturation green seed of 25–50 mg fresh wt.; Cot100 and SC100 are cotyledons and seed coats dissected from mid-maturation green seed of 100–200 mg fresh weight range; Cot300 are cotyledons dissected from late maturation yellow seeds of 300–400 mg weight range.
bGenome matched reads indicate the number of reads of 20 or 21 nt that matched to Glycine max genome sequence available in Phytozome. Transcriptome matched reads indicate the number of reads that matched to Glycine max transcriptome (Glyma models) available in Phytozome .
Shamimuzzaman and Vodkin
Shamimuzzaman and Vodkin BMC Genomics 2012 13:310 doi:10.1186/1471-2164-13-310