Table 1

Summary of the materials used in the EST analysis
Library Prefix Plate number cDNA amplification Sequence primer DNA sequencer Valid 5' reads Valid 3' reads Overlap contigs Full insert sequences
Eye Dj_aE 000 Plasmid SK ABI 3700 918* - - -
Head Dj_aH 000 Plasmid SK, M13 ABI 3700 6,444* 3,163 689 495
Head Dj_aH 001 - 022 Plasmid SK ABI 3700 5,024 - - 21
Head Dj_aH 101 - 140 Plasmid SK ABI 3700 2,364 - - 4
Head Dj_aH 201 - 227 TempliPhi SK ABI 3730xl 8,426 - - 52
Head Dj_aH 301 - 327 TempliPhi SK, M13 ABI 3730xl 8,366 7,107 4,516 21
Head Dj_aH 401 - 406 TempliPhi T3 ABI 3730xl 2,056 - - -
Head Dj_aH 501 - 530 TempliPhi T3, M13 ABI 3730xl 9,462 8,191 5,888 -
Total 43,060 18,461 11,093 593

* DDBJ entries registered by previous research.

Nishimura et al.

Nishimura et al. BMC Genomics 2012 13:289   doi:10.1186/1471-2164-13-289

Open Data