Additional file 10.
MeDIP sequence coverage of genomic features. Bars show the percent of each feature type with a non-zero RPKM value. RPKM values were calculated based on the feature width as defined in version 2.2 of the P. trichocarpa genome annotation. Promoters were defined as the 2 kb region upstream of the annotated transcription start site. Intergenic spaces were divided into 1 kb windows. The RepPop repetitive element feature includes all entries in the RepPop database. A) Uniquely-aligning reads; B) Distributed k-mer repeats.
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Vining et al. BMC Genomics 2012 13:27 doi:10.1186/1471-2164-13-27