|Identification of putative regulatory proteins with high occurrence in egg laying- and feeding-inducedUlmus minorleaves|
|Pfam accession||Gene description||# of ESTs||GO Biological process||Treatment (pptt)|
|PF00305||Lipoxygenase||1602||lipid biosynthetic process||110||43||33||38||162||38||30.9|
|No family||Sieve element-occluding protein||1545||-||245||40||66||19||86||33||27|
|PF00199||Catalase||1159||response to stress||73||24||28||25||54||19||6.7|
|PF00160||Peptidyl-prolyl cis-trans isomerase||773||protein folding||52||15||9||19||34||33||5.3|
|PF00227||Proteasome subunit||341||response to stress||21||8||5||4||24||9||3.9|
|PF05564||Auxin-repressed protein||207||signal transduction||26||3||-||2||-||-||4.3|
|PF01717||Methionine synthase||200||methionine biosynthetic process||42||4||-||2||16||9||8.7|
|PF01641||Methionine sulfoxide reductase||58||catalytic activity||34||1||-||-||-||5||8.3|
|No family||Protein transport protein SFT2||16||vesicle-mediated transport||78||-||-||-||-||-||29.9|
Treatments: C (untreated control), E (artificial scratching & eggs transferred), EF (egg deposition & feeding), F (feeding), MeJA (methyl jasmonate), mixed library EF + F. Relative Unitrans abundance calculated on counts by parts per ten thousand (pptt) based on the annotation to Plant UniProt (BLASTx, E-value ≤1e-20). Transcripts correlated on their predicted function to the Pfam = protein family database. R–values >3 were considered as significantly differentially expressed for the respective treatment against C (true positive rate of ~99%) by Test Statistics R .
Büchel et al.
Büchel et al. BMC Genomics 2012 13:242 doi:10.1186/1471-2164-13-242