Table 8

Pair-wise comparisons of Phi correlations of probe ratios greater than 2 between GenomiPhi and REPLI-g amplified samples
Sample Phi correlation value
Amp-G/UnAmp
Replicate 1 Replicate 2 Replicate 3 Replicate 4
Normal Replicate 1 0.746 0.724 0.782 0.725
Amp-R/UnAmp Replicate 2 0.729 0.712 0.783 0.706
Replicate 3 0.688 0.664 0.751 0.653
Replicate 4 0.814 0.772 0.811 0.763
CF1 Replicate 1 0.736 0.804 0.906 0.681
Amp-R/UnAmp Replicate 2 0.842 0.782 0.711 0.807
Replicate 3 0.828 0.804 0.815 0.738
Replicate 4 0.733 0.692 0.622 0.796
CF2 Replicate 1 0.762 0.771 0.833 0.835
Amp-R/UnAmp Replicate 2 0.776 0.773 0.831 0.818
Replicate 3 0.789 0.839 0.782 0.795
Replicate 4 0.736 0.741 0.825 0.828

The median values for Normal, CF1, and CF2 groups were 0.738, 0.789, and 0.792, respectively.

Han et al.

Han et al. BMC Genomics 2012 13:217   doi:10.1186/1471-2164-13-217

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