Table 1

Summary of sequencing and assembling data
Samples Reads Average Read length(bp) Number of contigs Average contigs length(bp) N50 Of contigs Mapped reads Expressed Genes
Raw Processed
FLJ B 32265956 24849381 76 32171 763 1394 11434981 6218
FLJ F1 30007720 15279615 81 41794 412 681 8602791 6088
FLJ F2 41392696 31858918 76 41608 544 1077 17927893 6591
rFLJ B 31021220 16497776 81 25232 692 1214 8943545 5837
rFLJ F2 26778792 12943328 81 39415 552 1093 4697897 5330

Abbreviations: FLJ, Lonicera japonica Thunb; rFLJ, Lonicera japonica Thunb. var. chinensis (Watts.); B, bud; F1, flower1; and F2, flower2.

Yuan et al.

Yuan et al. BMC Genomics 2012 13:195   doi:10.1186/1471-2164-13-195

Open Data