Table 3

Summary of KEGG pathways associated with all SDE genes
Pathway code Pathway name Over representedPvalue
04976 Bile secretion 0.001483
00140 Steroid hormone biosynthesis 0.002046
04950 Maturity onset diabetes of the young 0.004947
00910 Nitrogen metabolism 0.007765
00061 Fatty acid biosynthesis 0.011248
05219 PPAR signalling pathway 0.018112
03320 Bladder cancer 0.018941
04910 p53 signalling pathway 0.020756
04115 Insulin signalling pathway 0.021653
04977 Vitamin digestion and absorption 0.026059
00592 α-linolenic acid metabolism 0.030405
04975 Fat digestion and absorption 0.034363
04080 Neuroactive ligand-receptor interaction 0.040178

Pathway maps for KEGG pathways associated with all SDE genes (FDR 0.1.%) are in Additional file 6.

McCabe et al.

McCabe et al. BMC Genomics 2012 13:193   doi:10.1186/1471-2164-13-193

Open Data