Table 2

Summary of KEGG pathways associated with ≥2 fold SDE genes
Pathway code Pathway name Over representedPvalue
00140 Steroid hormone biosynthesis 0.000163
03320 PPAR signalling pathway 0.000903
04976 Bile secretion 0.000960
04977 Vitamin digestion and absorption 0.003082
04975 Fat digestion and absorption 0.004934
02010 ABC transporters 0.006003
00592 α-linolenic acid metabolism 0.006639
01040 Biosynthesis of unsaturated fatty acids 0.022054
00830 Retinol metabolism 0.031908

Pathway maps for KEGG pathways associated with ≥2-fold SDE genes (FDR0.1%) that are not included in the main text are in Additional file 5.

McCabe et al.

McCabe et al. BMC Genomics 2012 13:193   doi:10.1186/1471-2164-13-193

Open Data