Table 1

Dataset composition summary
Organism # Genomes
Pathogenic Non-pathogenic Pathogenic Non-pathogenic
Aliivibrio;
  A. fischeri 2 - 2 - -
  A. salmonicida 1 1 - - -
  A. wodanis 1 1 - - -
Vibrio;
  V. alginolyticus 2 1 1 - -
  V. anguillarum 1 1 - - -
  V. campbellii 1 - 1 - -
  V. cholerae1 26 11 2 11 -
  V. coralliilyticus 1 1 - - -
  V. furnissi 1 - - 1 -
  V. harveyi 3 2 1 - -
  V. metschnikovii 1 - - - 1
  V. mimicus 3 2 - 1 -
  V. orientalis 1 - - 1 -
  V. parahaemolyticus1 6 2 - 2 -
  V. splendidus 2 2 - - -
  V. shilonii 1 1 - - -
  V. vulnificus 2 - - 2 -
  V. sp. 4 1 3 - -
Photobacterium;
  P. angustum 1 - 1 - -
  P. damselae 1 - 1 - -
  P. profundum 2 - 2 - -
  P sp. 1 - 1 - -

Composition of the dataset used in this study. A complete list of all 64 genomes can be found in Additional File 1.

1The origin of two isolates, whether environmental or clinical, could not be determined.

Kahlke et al.

Kahlke et al. BMC Genomics 2012 13:179   doi:10.1186/1471-2164-13-179

Open Data