Additional file 1 .

Figure S1.Box plot of six gene expression patterns inferred from the HaCaT gene expression data for each of the three CoGAPS simulations (pages 1–3) for the samples in Table 1. Plotted values are normalized to sum to one across all samples. All results for HaCaT-EGFRWT are colored in green, HaCaT-HRASVal12D in red, HaCaT-EGFRWT in grey, HaCaT-p65WT in blue, and HaCaT-vector in black. The y-axis is labeled according to the row of the inferred P matrix plotted in each panel. Specifically, (a) contains the pattern attributed to the baseline HaCaT activity, (b) attributed to HaCaT-HRASVal12D, (c) HaCaT-vector, (d) HaCaT-EGFRWT, (e) serum, and (f) HaCaT-p65WT.

Format: PDF Size: 399KB Download file

This file can be viewed with: Adobe Acrobat Reader

Fertig et al. BMC Genomics 2012 13:160   doi:10.1186/1471-2164-13-160