Table 2

Identity and description of contigs obtained from T. cuspidata up-regulated SSH libraries
Contig Accession No Match with Accession No Description Query coverage (%) E Value
03 HE799317 ABR16435 Predicted Cytochrome P450 66 5.00E-72
08 HE799322 BAF46017 Putative class I chitinase 35 5.00E-64
21 HE799335 AAR13860 Taxadiene synthase 92 4.00E-61
25 HE799339 ABK26019 Unknown 34 1.00E-42
30 HE799344 BAD90813 Thaumatin-like protein 76 2.00E-37
04 HE799318 AAZ41362 Taxadiene synthase 94 5.00E-30
28 HE799342 XP_002264098 hypothetical protein 49 2.00E-27
26 HE799340 CAI56321 putative leucoanthocyanidin reductase 68 3.00E-25
18 HE799332 XP_002516771 putative Lipoxygenase 59 5.00E-25
15 HE799329 AAS89065 putative taxoid hydroxylase 65 8.00E-22
17 HE799331 ABK21418 Unknown 72 2.00E-23
29 HE799343 ACH59388 putative Chalcone synthase 36 3.00E-21
12 HE799326 AAO85809 putative S-adenosylmethionine synthetase 43 3.00E-20
09 HE799323 BAD10865 predicted 1-aminocyclopropane-1-carboxylic acid oxidase 79 7.00E-18
11 HE799325 ZP_03319418 Hypothetical protein 55 5.00E-16
01 HE799315 AAT73199 predicted taxoid acyltransferase 81 9.00E-16
14 HE799328 XP_002264858 Hypothetical protein 66 9.00E-16
07 HE799321 XP_002973748 Hypothetical protein (XP_002973748) 32 1.00E-15
16 HE799330 XP_001768181 similar to predicted protein (XP_001768181) 47 2.00E-15
27 HE799341 ABR16535 Unknown 16 7.00E-15
02 HE799316 ABR17205 putative DNA binding protein 79 2.00E-13
05 HE799319 ACN40018 Unknown 60 2.00E-09
32 HE799346 ADQ12769 Cytochrome P450 41 3.00E-09
06 HE799320 ABK22210 Unknown 39 8.00E-07
23 HE799337 ADK74829 putative Immunomodulatory protein 13 3.00E-05
20 HE799334 ABK23181 Unknown 11 3.00E-04
10 HE799324 ABK24846 putative Gibberellin 3-beta-hydroxylase 38 0.001
31 HE799345 ADM79415 similar to Dormancy/auxin associated-like protein 27 0.001
22 HE799336 YP_260089 Cytotoxin Mcf 41 0.003
19 HE799333 XP_002283086 hypothetical protein 8 0.005
13 HE799327 - No hits in the database - -
24 HE799338 - No hits in the database - -

Lenka et al.

Lenka et al. BMC Genomics 2012 13:148   doi:10.1186/1471-2164-13-148

Open Data