Table 3

Known Chlamydomonas reinhardtii miRNAs that are responsive to sulfur-deprivation

pairwise

miR-name

+S-std

-S-std

fold-change (log2 -S/+S)

p-value

sig-lable


+S/-S

miR1144a.1

2.7916

6.8556

1.29619070

3.00277572489945e-05

**


+S/-S

miR1144b

67.7967

174.2123

1.36155953

4.25092513184362e-107

**


+S/-S

miR1147.1

645.5638

2759.7732

2.09591812

0

**


+S/-S

miR1148.2

5.2842

13.2071

1.32155674

3.68981982177614e-09

**


+S/-S

miR1149.1

0.1994

1.4114

2.82338960

0.00218223161858286

**


+S/-S

miR1149.2

35.3938

81.9645

1.21150253

4.19876393573889e-43

**


+S/-S

miR1150.3

0.3988

1.2098

1.60103125

0.0464712840858496

*


+S/-S

miR1153.1

1051.8453

2991.5522

1.50797170

0

**


+S/-S

miR1153.2*

44.8654

96.4822

1.10465953

9.53780690450724e-44

**


+S/-S

miR1155

18.9432

63.0108

1.73391907

3.9298538924937e-56

**


+S/-S

miR1156.1

31.6052

729.5141

4.52870201

0

**


+S/-S

miR1156.2

37.1885

302.6536

3.02473905

0

**


+S/-S

miR1158

1.5952

4.5368

1.50793775

0.000148301262915249

**


+S/-S

miR1159.2

0.7976

2.1172

1.40842024

0.0148368997880162

*


+S/-S

miR1160.2

0.6979

36.3951

5.70458009

4.07725858511646e-98

**


+S/-S

miR1160.3

0.0997

9.1744

6.52387649

1.14199975919422e-26

**


+S/-S

miR1164

1.5952

4.0327

1.33800877

0.00109191543677247

**


+S/-S

miR1166.1

0.6979

2.7221

1.96362783

0.000450528886605393

**


+S/-S

miR1172.1

232.3033

921.3694

1.98777004

0

**


+S/-S

miR1172.2

308.0760

1139.3365

1.88683570

0

**


+S/-S

miR906-3p

11.8644

42.5449

1.84234706

1.13973265129334e-41

**


+S/-S

miR909.1

0.3988

1.4114

1.82338960

0.0180099225615881

*


+S/-S

miR910

260.9175

924.7972

1.82554332

0

**


+S/-S

miR912

2830.5107

6891.9725

1.28385457

0

**


pairwise: pair of samples in differentially expression analysis; miR-name: miRNA name; -std: normalized expression level of miRNA in a sample; fold change (log2 -S/+S): fold change of miRNAs in the pair of samples; p-value: p value which reflects the significance of miRNA differential expression between samples. Less p value shows more significance of difference of miRNA between samples; sig-label: significance label, **: fold change (log2) > 1 or fold change (log2) < -1, and p value < 0.01. *: fold change (log2) > 1 or fold change (log2) < -1, and 0.01 < = p value < 0.05

Shu and Hu BMC Genomics 2012 13:108   doi:10.1186/1471-2164-13-108

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