Table 1

Number of orthologous markers and characteristics of conserved Syntenic segment between coffee, tomato and grapevine genomes

Comparative maps

# Orthologous markers

# CSS

Mean CSS size

Max CSS size

Mean number of syntenic marker per CSS

Mean distance between adjacent syntenic markers


Coffee

vs. Tomato

318

27

18.2 cM

15.9 cM

50 cM

70.5 cM

6 (Max: 16)

4.3 cM

3.4 cM


Coffee vs.

Grapevine

299

29

14.3 cM

4.4 Mb

46.25 cM

15.6 Mb

6 (Max: 14)

3 cM

0.9 Mb


Tomato vs.

Grapevine

470

45

13.6 cM

3.9 Mb

69.6 cM

11.7 Mb

5 (Max: 17)

3 cM

0.9 Mb


Guyot et al. BMC Genomics 2012 13:103   doi:10.1186/1471-2164-13-103

Open Data