Table 1 |
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|
Summary of the RNA-seq data collected from MT and WT at each of four selected fruit developmental stages |
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|
Category |
120DAF |
150DAF |
190DAF |
220DAF |
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|
|
|||||||||
|
Total Sequence Collected |
WT |
2718771 |
4184144 |
4417154 |
4564850 |
||||
|
MT |
3998867 |
3254246 |
4275571 |
4745537 |
|||||
|
Low Quality Tags |
WT |
187214 |
6.89% |
393141 |
9.40% |
356403 |
8.07% |
397623 |
8.71% |
|
MT |
359939 |
8.99% |
263844 |
8.11% |
401180 |
9.38% |
451906 |
9.52% |
|
|
Reliable Tags |
WT |
2531557 |
93.11% |
3791003 |
90.60% |
4060751 |
91.93% |
4167227 |
91.29% |
|
MT |
3638928 |
91.00% |
2990402 |
91.89% |
3874391 |
90.62% |
4293631 |
90.48% |
|
|
Distinct tags |
WT |
60841 |
2.24% |
111341 |
2.66% |
95693 |
2.17% |
101845 |
2.23% |
|
MT |
101301 |
2.53% |
92270 |
2.84% |
104280 |
2.44% |
113006 |
2.38% |
|
|
|
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|
DAF, days after flowering. |
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|
Yu et al. BMC Genomics 2012 13:10 doi:10.1186/1471-2164-13-10 |
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