Table 1

Online resources for the reconstruction of the metabolic network of Chlamydomonas reinhardtii



Genome Database

DOE Joint Genome Institute (JGI); Chlamydomonas reinhardtii v4.0 webcite

An Online Informatics Resource for Chlamydomonas (Chlamy Center) webcite

Pathway Databases

Kyoto Encyclopedia of Genes and Genomes (KEGG) webcite

ChlamyCyc webcite

Metacyc webcite

ExPASy Biochemical Pathways webcite

Enzymes Databases

ExPASy Enzyme Database webcite webcite

Enzyme/Protein Localization and others Databases*

AraPerox (Arabidopsis Protein from Plant Peroxisomes) webcite

SUBA (Arabidopsis subcellular database) webcite

PPDB (Plant proteome database) webcite

UniproKB/SwissProt webcite

Transport DB webcite

*Manual curation based on literature and homology sequence.

Gomes de Oliveira Dal’Molin et al. BMC Genomics 2011 12(Suppl 4):S5   doi:10.1186/1471-2164-12-S4-S5

Open Data