Table 9

Comparative analysis of four reliable H37Rv B2H PPI subsets

Benchmark (b)

Dataset (b) PPIs No.

Testing (t)

Dataset (t) PPIs No.

Overlap PPI No.

Jaccard coefficient

Precision

Recall

Benchmark PPI No.

Testing PPI No.


B2Hco-express

223

B2HsameGO

115

17

0.85

0.89

0.944

18

19

B2Hco-express

223

B2HSTRING

276

27

0.44

0.77

0.5

54

35

B2Hco-express

223

B2HdiffExp

147

4

0.16

0.27

0.29

14

15

B2HsameGO

115

B2HdiffExp

147

0

0

Null

0

1

0

B2HsameGO

115

B2HSTRING

276

11

0.48

0.73

0.58

19

15

B2HSTRING

276

B2HdiffExp

147

6

0.16

0.19

0.55

11

31


The table is a summary of brief comparative analysis of four reliable H37Rv B2H PPI subsets.

Zhou and Wong BMC Genomics 2011 12(Suppl 3):S20   doi:10.1186/1471-2164-12-S3-S20

Open Data