Table 9

Differentially expressed genes in C and CT berries at the EV stage belonging to "Carbohydrate metabolic process", "Secondary metabolic process" and "Transport" functional categories.

Gene_ID

Description

Metabolic Process

FC CT/C at EV


VIT_19s0014g00300

alpha, alpha-trehalose-phosphate synthase

Stress tolerance

-5.20

VIT_15s0024g00630

pyruvate decarboxylase isozyme 2

Glycolysis

5.52

VIT_13s0047g00760

Cinnamyl alcohol dehydrogenase

Phenolic acid metabolism

6.58

VIT_00s0371g00010

cinnamyl alcohol dehydrogenase

Phenolic acid metabolism

5.03

VIT_19s0135g00230

CYP72A1

Electron transport

7.69

VIT_19s0015g02520

CYP72A1

Electron transport

5.28

VIT_19s0015g02540

CYP72A59

Electron transport

7.30

VIT_19s0015g02780

CYP72A59

Electron transport

5.48

VIT_07s0104g01810

Glutathione S-transferase 13 GSTF13

Secondary metabolism/Oxidative stress

8.03

VIT_06s0004g05680

Glutathione S-transferase 25 GSTU7

Secondary metabolism/Oxidative stress

5.11

VIT_18s0041g00840

UDP-glucose: flavonoid 5,3-O-glucosyltransferase

Flavonoid metabolism

10.10

VIT_18s0041g00950

UDP-glucose: flavonoid 5,3-O-glucosyltransferase

Flavonoid metabolism

5.04

VIT_16s0100g00350

ABC transporter B member 8

Secondary metabolite transport

-5.12

VIT_15s0045g01030

MRP-like ABC transporter MRP6

Secondary metabolite transport

9.44

VIT_14s0030g00900

MRP-like ABC transporter MRP6

Secondary metabolite transport

5.09

VIT_10s0003g03470

MRP5

Secondary metabolite transport

7.80


For each gene (Gene_ID) the annotation (Description), the function (Metabolic Process), and the Fold Change (FC) between CT and C at the EV stage are reported.

Pastore et al. BMC Genomics 2011 12:631   doi:10.1186/1471-2164-12-631

Open Data