Table 4

Number of ESTs assigned to each genomic database

Reference organism

Number of matches, initial EST set

Number of matches, final EST set


Ae. albopictus

1,011

52

Ae. aegypti transcripts

91,461

10,005

Ae. aegypti genome, annotated

1,422

142

Ae. aegypti genome, unannotated

10,736

N/A

Ae. aegypti peptides

2,993

556

Cx. quinquefasciatus.

1,167

550

An. gambiae

103

79

D. melanogaster

21

16

C. elegans

25

19

Swiss-Prot

4,331

86

total number of matches

113,270

11,505


no hit (contigs)

6,775

N/A

no hit (singletons)

37,077

N/A

total number of contigs

69,474

N/A

total number of singletons

87,648

N/A


Both the preliminary EST set and final, trimmed EST set are listed (see Methods).

Poelchau et al. BMC Genomics 2011 12:619   doi:10.1186/1471-2164-12-619

Open Data