Table 2

N50 values, and mean and median lengths, for reads and EST sets

N50

Mean read length

Median read length


Trimmed reads

482

417.98

467

redundant EST set

Contigs only

1009

898.25

692

redundant EST set

Contigs and singletons

641

601.75

493

trimmed EST set

Contigs only

1120

801.25

647

trimmed EST set

Contigs and singletons

974

688.48

508


Poelchau et al. BMC Genomics 2011 12:619   doi:10.1186/1471-2164-12-619

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