Table 1

Comparison between our motifs and the three validated motifs reported in [17,6]

Our Motif

Validated Motif

Reference

Our PWM

Validated PWM

Similarity Score


GTGCAC

GTGCAC

PFF0200c[1]

0.997


GTGCAC shift 1b center extend 1b center

NGGTGCA

PfM18.1[2]

0.834


TATGCAT shift 2b right extend 1b right

TGCATGCA

PF14_0633[1]

0.704


Harris et al. BMC Genomics 2011 12:601   doi:10.1186/1471-2164-12-601

Open Data