Table 1

Sequencing libraries and sequencing runs

Library

Run name

Read length

F3 reads

R3 reads


Black Angus FR 50

solid_BA_FR1

50 nt

172,104,943

0


Black Angus FR 50

solid_BA_FR2

50 nt

225,062,253

0


Black Angus MP 25

solid_BA_MP1

25 nt

73,568,858

73,917,320


Black Angus MP 25

solid_BA_MP2

25 nt

76,123,158

76,573,521


Black Angus MP 25

solid_BA_MP3

25 nt

69,657,261

69,108,403


Black Angus MP 25

solid_BA_MP4

25 nt

356,566,421

356,848,504


Black Angus MP 50

solid_BA_MP5

50 nt

220,164,958

220,910,123


Black Angus MP 50

solid_BA_MP6

50 nt

78,350,806

80,494,794


Black Angus MP 50

solid_BA_MP7

50 nt

343,878,503

346,998,757


Holstein MP 50

solid_HOL_MP1

50 nt

140,503,099

142,438,241


Holstein MP 50

solid_HOL_MP2

50 nt

190,712,998

191,191,811


Holstein FR 50

solid_HOL_FR1

50 nt

172,127,298

0


Holstein FR 50

solid_HOL_FR2

50 nt

321,848,214

0


Holstein MP 25

solid_HOL_MP3

25 nt

160,118,556

159,430,437


Holstein MP 25

solid_HOL_MP4

25 nt

281,714,461

281,402,729


Three libraries were constructed for each animal and sequenced using two or more instrument runs. The numbers of reads obtained for fragment libraries is given in the F3 reads column. Mate-paired libraries yielded two read types (F3 reads and R3 reads).

Stothard et al. BMC Genomics 2011 12:559   doi:10.1186/1471-2164-12-559

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