Table 2

Assembly statistics from TGICL (I), and figures obtained after Pyrocleaner analysis (II), for the set of sequences reported here (III)

TGICL (I)

Pyrocleaner (II)

E. spp (III)


# Contigs

80,854

69,584

49,748

# reads in contigs

1,843,806

1,386,859

851,751

Average length of all contigs (bp)

552

608

734

# Large Contigs >500 bp

34,076

33,962

32,694

Average length of large contigs

900

901

912

# Singletons

150,861

132,695

80,245

# UE

231,715

202,279

129,993


Villar et al. BMC Genomics 2011 12:538   doi:10.1186/1471-2164-12-538

Open Data