Table 1 |
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|
Region of difference (RD) profiles in BCG Mexico strains. |
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|
BCG |
Profile of regions of difference |
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|
Substrains |
RD1 |
RD2 |
RD8 |
RD14 |
RD16 |
RD18 |
RDD/G |
IS6110 |
DU2 |
|
|
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|
Mexico seed lot 1931 |
- |
- |
+ |
+ |
+ |
- |
+ |
+ |
IV |
|
Phipps |
- |
- |
+ |
+ |
+ |
- |
+ |
+ |
IV |
|
Tice |
- |
- |
+ |
+ |
+ |
- |
+ |
+ |
IV |
|
Mexico seed lot 1988 |
- |
- |
+ |
+ |
+ |
+ |
- |
+ |
III |
|
Mexico vaccine 1997 |
- |
- |
+ |
+ |
+ |
+ |
- |
+ |
III |
|
Danish 1331 |
- |
- |
+ |
+ |
+ |
+ |
- |
+ |
III |
|
|
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|
The symbol (-) indicates the loss of a region in the genome of a given strain, whereas the symbol (+) indicates the presence of the region. RD = region of difference; IS6110 = insertion sequence IS6110 (presence of a single copy); DU = tandem duplication. |
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|
Orduña et al. BMC Genomics 2011 12:493 doi:10.1186/1471-2164-12-493 |
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