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Open Access Research article

Partial sequencing of the bottle gourd genome reveals markers useful for phylogenetic analysis and breeding

Pei Xu1, Xiaohua Wu1, Jie Luo2, Baogen Wang1, Yonghua Liu1, Jeffrey D Ehlers3, Sha Wang1, Zhongfu Lu1 and Guojing Li1*

Author Affiliations

1 Institute of Vegetables, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, PR China

2 Institute of Digital Agricultural Research, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, PR China

3 Department of Botany and Plant Sciences, University of California, Riverside, CA 92521-0124 USA

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BMC Genomics 2011, 12:467  doi:10.1186/1471-2164-12-467

Published: 27 September 2011

Additional files

Additional file 1:

Functional annotation of the contigs/singletons. The annotation of putative functions of the contigs/singletons with an E-value equal to or smaller than e-10 through BLAST X.

Format: XLS Size: 4.1MB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 2:

Sequence comparison between bottle gourd and cucumber. BLAST N result between bottle gourd gene space sequences and cucumber genome. Highlighted are percentage identity values.

Format: XLS Size: 2.9MB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 3:

Bottle gourd SSR markers developed. Sequences and characteristics of the microsatellite markers developed from bottle gourd contig/singleton sequences.

Format: XLS Size: 112KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data