Open Access Highly Accessed Research article

Characterization of transcriptome dynamics during watermelon fruit development: sequencing, assembly, annotation and gene expression profiles

Shaogui Guo12, Jingan Liu1, Yi Zheng2, Mingyun Huang2, Haiying Zhang1, Guoyi Gong1, Hongju He1, Yi Ren1, Silin Zhong2, Zhangjun Fei23* and Yong Xu1*

Author Affiliations

1 National Engineering Research Center for Vegetables, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, China

2 Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, NY 14853, USA

3 USDA Robert W. Holley Center for Agriculture and Health, Tower Road, Ithaca, NY 14853, USA

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BMC Genomics 2011, 12:454  doi:10.1186/1471-2164-12-454

Published: 21 September 2011

Additional files

Additional file 1:

Changes of soluble solid content (SSC), flesh firmness, and fruit weight during watermelon fruit development.

Format: PDF Size: 28KB Download file

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Additional file 2:

watermelon SSRs. The table provides the list of SSRs identified from watermelon ESTs, their motif sequences and surrounding primer pair information

Format: XLS Size: 1.8MB Download file

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Additional file 3:

Differentially expressed genes. The table provides the list of differentially expressed genes during watermelon fruit development

Format: XLS Size: 512KB Download file

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Additional file 4:

Enriched Gene Ontology (GO) terms. The table provides the list of enriched GO terms within the biological process category identified from differentially expressed genes during watermelon fruit development

Format: XLS Size: 27KB Download file

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Additional file 5:

Significantly altered pathways. The table provides the list of significantly altered biochemical pathways during watermelon fruit development

Format: XLS Size: 22KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data