Table 1

T. cacao BAC library overview

Library

Restriction enzyme

BAC vector

No. clones

Average insert size (kb)

Insert range (kb)

Genome coverage*

HICF fragments (avg)

Control clones

Successful fingerprints


TC_Bba

HindIII

pIndigoBAC536

36864

145

90-185

10×

120.2

768

31864


TC_BBb

EcoRI

pIndigoBAC536

36864

120

40-160

10×

102.1

768

32218


TC_BBc

MboI

pIndigoBAC536

36864

140

80-180

10×

120.4

768

31304


*Assumes 440 Mbp genome size.

Saski et al. BMC Genomics 2011 12:413   doi:10.1186/1471-2164-12-413

Open Data