Table 3

Genes with different expression in strains tpk1 tpk2 tpk3 msn2 msn4 and tpk1 tpk2 tpk3 yak1 during growth on a gluconeogenic carbon source

Gene

WT

tpk1 tpk2 tpk3 msn2 msn4

tpk1 tpk2 tpk3 yak1


HXK1*

459

77

228


HSP104*

327

121

229


MSC1*

629

58

296


SOL4*

148

28

107


YKL187c

321

28

124


GLC3*

390

96

425


GLK1*

852

465

889


GPX1*

271

41

196


GSY2*

184

45

245


HSP12*

3790

807

2436


HPF1*

650

137

611


NCA3

744

134

683


SOD1*

1964

841

1558


STF2

838

183

1004


TPS1*

569

245

612


TSL1*

274

45

245


ATF2

31

33

173


PRM5

116

339

164


SSA2

997

1519

611


DAL3

198

403

58


FSH1

220

271

68


Yeast strains TPK1 TPK2 TPK3, tpk1 tpk2 tpk3 msn2 msn4, and tpk1 tpk2 tpk3 yak1, were grown on ethanol and samples were taken before the addition of glucose to the medium, as described in Methods. mRNA levels were measured using Affymetrix microarrays. Biological duplicates were performed. Expression data from biological replicates generally differed from the average by less than 20%. Expression is shown in arbitrary units. (* Genes known to be activated by Msn2/4).

Livas et al. BMC Genomics 2011 12:405   doi:10.1186/1471-2164-12-405

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