Whole genome alignment of the two strains of S. gallolyticus subsp. gallolyticus. Representation of 13 local collinear blocks (LCB) between chromosomal sequences of the S. gallolyticus subsp. gallolyticus BAA-2069 and UCN34 was generated by MAUVE 2.3.1 software  with a minimum weight of 355. Sequence of BAA-2069 (top) is the reference against UCN34. The connecting lines between blocks indicate the location of each block in the two genomes. Each colored block represents a homologous region without rearrangements, although white areas within blocks are strain-specific.
Hinse et al. BMC Genomics 2011 12:400 doi:10.1186/1471-2164-12-400