Open Access Research article

Gene discovery by genome-wide CDS re-prediction and microarray-based transcriptional analysis in phytopathogen Xanthomonas campestris

Lian Zhou1, Frank-Jörg Vorhölter2, Yong-Qiang He3, Bo-Le Jiang3, Ji-Liang Tang3, Yuquan Xu1, Alfred Pühler2* and Ya-Wen He1*

1 National Center for Molecular Characterization of GMOs and State Key Laboratory of Microbial Metabolism, School of Life Science and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China

2 Universität Bielefeld, CeBiTec, Universitätsstr.25, D-33615 Bielefeld, Germany

3 State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, Nanning 530004, China

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BMC Genomics 2011, 12:359 doi:10.1186/1471-2164-12-359

Published: 12 July 2011

Additional files

Additional file 1:

Supplementary tables. The putative new CDSs identified by similarity searching. The new CDSs identical to the CDSs annotated in Xcc strain B100. The new CDSs with detectable transcripts by microarray analysis. Oligos used in this study.

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