Table 1

Summary of contig length properties for the total number of contigs as well as contigs larger than 200bp, resulting from different assemblers and meta-assembly, respectively

all contigs

> 200bp contigs


Velvet

NGen

ORK21

ORK31

Meta

Velvet

NGen

ORK21

ORK31

Meta


Min

61

31

55

52

61

200

200

200

200

200

Max

2257

2435

2070

2551

2667

2257

2435

2070

2551

2667

Mean

120

303

267

309

432

398

428

442

443

536

Median

93

217

179

213

341

326

338

359

359

442

Total

220,153

57,986

52,477

41,590

54,450

20,346

31,898

23,816

22,089

39,941


(ORK21/31: OASESk-mer = 21/31)

Feldmeyer et al. BMC Genomics 2011 12:317   doi:10.1186/1471-2164-12-317

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