Table 2

Summary of BLAST search and annotation

Fagopyrum esculentum

Fagopyrum tataricum


Contigs


Number of contigs with BLAST match

19122

19072


Number of contigs with GO annotation

15115

14684


Number of contigs without BLAST matches

6313

6329


Number of contigs with predicted ORF/mean length of ORF, bp

25345/368 (30-1637) 25115 > 90

24984/390 (39-1983) 24743 > 90


Species provided most of all best BLAST hits

Vitis vinifera

Vitis vinifera


Singletons


Total number of singletons

56766

42899


Number of singletons with BLAST match

14260

14671


Number of singletons with GO annotation

10303

10448


Number of singletons without BLAST matches

42506

28228


Species provided most of all best BLAST hits

Vitis vinifera

Vitis vinifera


Logacheva et al. BMC Genomics 2011 12:30   doi:10.1186/1471-2164-12-30

Open Data