Research article
Seeds for effective oligonucleotide design
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* Corresponding author: Lucian Ilie ilie@csd.uwo.ca
1 Department of Computer Science, University of Western Ontario, N6A 5B7, London, ON, Canada
2 Department of Mathematics, Ryerson University, M5B 2K3, Toronto, ON, Canada
BMC Genomics 2011, 12:280 doi:10.1186/1471-2164-12-280
Published: 1 June 2011Additional files
Additional file 1:
This file contains all the seeds used in our tests. The contiguous, transition, and single spaced seeds are the same as in [20]. The multiple spaced seeds were computed using SpEED.
Format: PDF Size: 51KB Download file
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Additional file 2:
This file contains the complete results of our tests for all the 50-mer data sets.
Format: XLSX Size: 58KB Download file
Additional file 3:
This file contains the complete results of our tests for all the 70-mer data sets.
Format: XLSX Size: 58KB Download file