Table 4

Probes used for Taqman analysis of specific miRNA sequences

miRBase name

Company name

Sequence detected


tgu-let-7a

let-7a

5'-UGAGGUAGUAGGUUGUAUAGUU-3'

tgu-let-7f

let-7f

5'-UGAGGUAGUAGAUUGUAUAGUU-3'

tgu-miR-124

miR-124

5'-UAAGGCACGCGGUGAAUGCC-3'

tgu-miR-9

miR-9

5'-UCUUUGGUUAUCUAGCUGUAUGA-3'

tgu-miR-129-5p

miR-129-5p

5'-CUUUUUGCGGUCUGGGCUUGC-3'

tgu-miR-129-3p

miR-129-3p

5'-AAGCCCUUACCCCAAAAAGCAU-3'

tgu-miR-29a

miR-29c

5'-UAGCACCAUUUGAAAUCGGU-3'

tgu-miR-92

miR-92a

5'-UAUUGCACUUGUCCCGGCCUGU-3'

tgu-miR-25

miR-25

5'-CAUUGCACUUGUCUCGGUCUGA-3'

RNU6B

RNU6B

5'-CGCAAGGAUGACACGCAAAUUCGUGAAGCGUUCCAUAUUUUU-3'

tgu-miR-2954-5p

novel51F-5p

5'-GCUGAGAGGGCUUGGGGAGAGGA-3'

tgu-miR-2954-3p

novel51F-3p

5'-CAUCCCCAUUCCACUCCUAGCA-3' (Northern validated)

tgu-miR-2954R-5p

novel51R-5p

5'-UGCUAGGAGUGGAAUGGGGAUG-3'

tgu-miR-2954R-3p

novel51R-3p

5'-UCCUCUCCCCAAGCCCUCUCAGC-3'


Gunaratne et al. BMC Genomics 2011 12:277   doi:10.1186/1471-2164-12-277

Open Data