Table 6

Top 50 ABA-repressed genes in guard cells that have not been reported in other ABA transcriptome studies

AGI #

Gene name

Description

P-value

Fold change


AT2G45120

zinc finger (C2H2 type) family protein

4.7E-15

14.7

AT1G60630

leucine-rich repeat family protein

8.2E-13

6.7

AT3G19850

phototropic-responsive NPH3 family protein

3.3E-12

13.3

AT1G19620

unknown protein

1.1E-11

9.0

AT1G11340

S-locus lectin protein kinase family protein

1.5E-11

23.6

AT4G04955

ATALN

ARABIDOPSIS ALLANTOINASE

2.8E-11

3.3

AT3G19120

unknown protein

3.4E-11

10.6

AT4G37870

PCK1

PHOSPHOENOLPYRUVATE CARBOXYKINASE 1

3.7E-11

4.5

    AT4G01770

RGXT1

RHAMNOGALACTURONAN XYLOSYLTRANSFERASE 1

1.2E-10

7.3

AT5G47780

GAUT4

Galacturonosyltransferase 4

2.4E-10

4.2

AT5G52120

ATPP2-A14

Phloem protein 2-A14; carbohydrate binding

2.9E-10

6.1

    AT1G21540

AMP-binding protein, putative

4.6E-10

6.8

AT1G09010

glycoside hydrolase family 2 protein

7.3E-10

3.4

AT1G28010

PGP14

P-GLYCOPROTEIN 14; ATPase

1.2E-09

12.6

AT3G52870

calmodulin-binding family protein

1.7E-09

10.2

AT1G75880

family II extracellular lipase 1 (EXL1)

2.5E-09

4.2

    AT2G25780

unknown protein

3.8E-09

48.1

AT2G45810

DEAD/DEAH box helicase, putative

6.7E-09

4.1

AT3G62780

C2 domain-containing protein

7.6E-09

6.7

AT5G57580

calmodulin-binding protein

1.5E-08

2.8

AT3G09770

zinc finger (C3HC4-type RING finger) family protein

1.6E-08

3.3

AT4G08920

CRY1

CRYPTOCHROME 1

1.7E-08

4.8

AT2G34160

nucleic acid binding

1.7E-08

4.9

AT3G24140

FMA

FMA (FAMA); DNA binding/transcription activator

1.9E-08

5.3

AT1G75450

CKX5

CYTOKININ OXIDASE 5; cytokinin dehydrogenase

2.1E-08

2.9

    AT3G11540

SPY

SPINDLY; transferase, transferring glycosyl groups

2.1E-08

2.6

AT3G51390

zinc finger (DHHC type) family protein

2.3E-08

2.8

AT1G12730

cell division cycle protein-related

2.5E-08

5.3

AT1G11260

STP1

SUGAR TRANSPORTER 1

2.6E-08

3.3

    AT2G16640

ATTOC132

MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132

2.9E-08

2.7

    AT5G53890

leucine-rich repeat transmembrane protein kinase

3.3E-08

3.3

AT5G11580

UVB-resistance protein-related

3.6E-08

2.7

AT2G22300

SR1

SIGNAL RESPONSIVE 1; calmodulin binding

4.5E-08

6.5

AT5G23880

CPSF100

CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR

4.6E-08

1.8

    AT2G44065

ribosomal protein L2 family protein

5.1E-08

2.9

AT3G17020

universal stress protein (USP) family protein

5.2E-08

2.7

AT1G74040

IMS1

IMS1; 2-isopropylmalate synthase

5.4E-08

3.7

AT1G17230

protein binding/protein kinase

5.5E-08

3.4

AT3G05160

sugar transporter, putative

5.9E-08

4.8

AT2G37420

kinesin motor protein-related

6.0E-08

11.0

AT1G63120

ATRBL2

ARABIDOPSIS THALIANA RHOMBOID-LIKE 2

6.3E-08

3.1

AT5G64560

magnesium transporter CorA-like family protein

8.8E-08

2.4

AT5G63620

zinc-binding dehydrogenase family protein

9.3E-08

2.6

AT4G26830

hydrolase, hydrolyzing O-glycosyl compounds

9.9E-08

7.3

AT1G21400

2-oxoisovalerate dehydrogenase, putative

1.3E-07

3.0

AT5G48950

thioesterase family protein

1.3E-07

5.2

AT5G37450

leucine-rich repeat transmembrane protein kinase

1.4E-07

9.9

AT3G05660

AtRLP33

Receptor Like Protein 33; kinase/protein binding

1.5E-07

3.1

AT3G58840

similar to myosin heavy chain-related AT1G06530.1

1.8E-07

3.9

AT4G38300

glycosyl hydrolase family 10 protein

2.1E-07

3.8


The fold changes are calculated by averaging three biological replicates and comparing the average expression values with ABA treatment to those without ABA treatment. The genes with underlines also appear in our leaf ABA-repressed genes.

Wang et al. BMC Genomics 2011 12:216   doi:10.1186/1471-2164-12-216

Open Data