Table 3

67 ABA-induced genes common to ≥ 9 experiments

Genes

Descriptions

No.


AT1G01470*^

LEA14 (LATE EMBRYOGENESIS ABUNDANT 14)

14

AT2G33380*^

RD20 (RESPONSIVE TO DESSICATION 20); calcium ion binding

13

AT3G11410*^

AHG3/ATPP2CA (ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA)

13

AT1G20440*^

COR47 (cold regulated 47)

12

AT1G52690*^

late embryogenesis abundant protein, putative

12

AT1G72770*^

HAB1 (HOMOLOGY TO ABI1); protein serine/threonine phosphatase

12

AT2G41190*^

amino acid transporter family protein

12

AT2G47770*

benzodiazepine receptor-related

12

AT5G06760*^

late embryogenesis abundant group 1 domain-containing protein

12

AT1G08920*

sugar transporter, putative

11

    AT1G77450
*

ANAC032 (Arabidopsis NAC domain containing protein 32)

11

AT2G15970*^

COR413-PM1 (cold regulated 413 plasma membrane 1)

11

AT2G46270*^

GBF3 (G-BOX BINDING FACTOR 3); transcription factor

11

AT2G46680 ^

ATHB-7 (ARABIDOPSIS THALIANA HOMEOBOX 7); transcription factor

11

AT4G27410*

RD26 (RESPONSIVE TO DESSICATION 26); transcription factor

11

AT5G52310*^

COR78 (COLD REGULATED 78)

11

    AT5G59320
*

LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding

11

AT5G66400*^

RAB18 (RESPONSIVE TO ABA 18)

11

AT1G04220*^

KCS2 (3-KETOACYL-COA SYNTHASE 2); fatty acid elongase

10

AT1G05100*^

MAPKKK18 (Mitogen-activated protein kinase kinase kinase 18)

10

    AT1G16850
*

unknown protein

10

AT1G20450

ERD10/LTI45 (EARLY RESPONSIVE TO DEHYDRATION 10)

10

AT1G49450*

transducin family protein/WD-40 repeat family protein

10

    AT1G51140
*

basic helix-loop-helix (bHLH) family protein

10

    AT1G58270
*

ZW9

10

AT3G11420

fringe-related protein

10

    AT3G29575
*

AFP3 (ABI FIVE BINDING PROTEIN 3)

10

AT3G61890 ^

ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 12)

10

    AT4G05100
*

AtMYB74 (myb domain protein 74); DNA binding/transcription factor

10

AT4G24130*^

unknown protein

10

AT4G26080*

ABI1 (ABA INSENSITIVE 1); calcium ion binding

10

AT4G30960*

CIPK6 (CBL-INTERACTING PROTEIN KINASE 6); kinase

10

    AT5G01520
*

zinc finger (C3HC4-type RING finger) family protein

10

AT5G15960

Stress-induced protein KIN1

10

    AT5G59220
*

protein phosphatase 2C, putative/PP2C, putative

10

    AT1G07430
*

protein phosphatase 2C, putative

9

AT1G07720

KCS3 (3-KETOACYL-COA SYNTHASE 3)

9

    AT1G21790
*

similar to unnamed protein product [Vitis vinifera] (GB:CAO61872.1)

9

AT1G60190*

armadillo/beta-catenin repeat family protein/U-box domain-containing protein

9

AT1G62570*

FMO GS-OX4 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 4)

9

AT1G62710*

BETA-VPE (vacuolar processing enzyme beta); cysteine-type endopeptidase

9

    AT1G73480
*

hydrolase, alpha/beta fold family protein

9

    AT1G77120
*

ADH1 (ALCOHOL DEHYDROGENASE 1)

9

AT2G17840 ^

ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7)

9

AT2G30360*

CIPK11 (SOS3-INTERACTING PROTEIN 4); kinase

9

AT2G30550*

lipase class 3 family protein

9

AT2G37870

protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

9

    AT2G39050
*

hydroxyproline-rich glycoprotein family protein

9

AT2G47780*

rubber elongation factor (REF) protein-related

9

    AT3G02480
*

ABA-responsive protein-related

9

AT3G17520*^

late embryogenesis abundant domain-containing protein

9

    AT3G22600
*

protease inhibitor/seed storage/lipid transfer protein (LTP) family protein

9

    AT3G48510

unknown protein

9

AT3G50970 ^

LTI30 (LOW TEMPERATURE-INDUCED 30)

9

    AT3G55500
*

ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)

9

    AT3G57010
*

strictosidine synthase family protein

9

AT4G17550*

transporter-related

9

AT4G21440*^

ATM4/ATMYB102 (ARABIDOPSIS MYB-LIKE 102); transcription factor

9

AT4G23050*

protein kinase, putative

9

    AT4G30470
*

cinnamoyl-CoA reductase-related

9

AT4G33550

lipid binding

9

AT4G34000*^

ABF3/DPBF5 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3)

9

    AT5G11110
*

ATSPS2F/SPS1 (SUCROSE PHOSPHATE SYNTHASE 1)

9

AT5G52300*^

LTI65/RD29B (RESPONSIVE TO DESSICATION 29B)

9

AT5G57050*

ABI2 (ABA INSENSITIVE 2); protein serine/threonine phosphatase

9

    AT5G59310
*

LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding

9

    AT5G61820
*

similar to MtN19-like protein [Pisum sativum] (GB:AAU14999.2)

9


The first column lists the AGI locus identifiers of the genes. *Genes that appear in our guard cell ABA-induced gene set. ^Genes that appear in Leonhardt et al.'s guard cell ABA-induced gene set [16]. The genes that appear in our ABA-induced gene set are marked with underlines if they are not represented on the Affymetrix ~8K chips used in [16]. The second column gives brief TAIR descriptions for the genes. The third column indicates the number of experiments that the genes are found common to.

Wang et al. BMC Genomics 2011 12:216   doi:10.1186/1471-2164-12-216

Open Data