Additional file 1.

Figure S1. Histograms showing distributions for count and variation of coverage and ratio data. A) Median raw coverage: median coverage across samples for each base. B) SD raw coverage: standard deviation for raw coverage generated for each lane (8 samples), median SD across 8 lanes plotted. C) SD normalized coverage: standard deviation for normalized coverage generated for each lane (12 samples), median value across 8 lanes plotted. D) S:N normalized coverage: signal to noise ratio (mean/SD) for normalized coverage for each lane, median value across 8 lanes plotted. E) S:N corrected coverage: signal to noise ratio (mean/SD) for normalized coverage corrected for GC-content and bait capture bias for each lane, median value across 8 lanes plotted. F) Ratio: sample compared to lane median corrected normalized coverage for all bases, data from 10 representative samples plotted.

Format: PDF Size: 311KB Download file

This file can be viewed with: Adobe Acrobat Reader

Nord et al. BMC Genomics 2011 12:184   doi:10.1186/1471-2164-12-184