Table 1

Summary of genotyping results of microsatellite markers isolated from BAC end sequences for integration between the genetic and physical maps

No. of markers identified

205 (from 117 contigs)

Informative for linkage analysis

128 (63%; 88 contigs; 129 loci)

Mapped to linkage groups

127 loci (98.5%; 88 contigs)

PCR optimization failed

58 (28%)

Monomorphic in mapping panel

10 (5%)

Duplicated

15 (9 informative for mapping and 6 non-informative)

Redundancy in contig coverage (optimized, but panel not genotyped)

3 markers


Palti et al. BMC Genomics 2011 12:180   doi:10.1186/1471-2164-12-180

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