Open Access Highly Accessed Research article

ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis

Joshua WK Ho12, Eric Bishop23, Peter V Karchenko125, Nicolas Nègre4, Kevin P White4 and Peter J Park125*

Author Affiliations

1 Department of Medicine, Brigham and Women's Hospital, and Harvard Medical School, Boston, MA, USA

2 Center for Biomedical Informatics, Harvard Medical School, Boston, MA, USA

3 Program in Bioinformatics, Boston University, Boston, MA, USA

4 Institute for Genomics and Systems Biology, University of Chicago, Chicago, IL, USA

5 Informatics Program, Children's Hospital, Boston, MA, USA

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BMC Genomics 2011, 12:134  doi:10.1186/1471-2164-12-134

Published: 28 February 2011

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Supplemental tables. This file contains supplementary tables.

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Supplemental figures. This file contains supplementary figures.

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