Table 4

Exon shuffling signal given by intron flanking for different classes of domain regarding self-interaction

Species

Group

Domain category

Flanked domains

Total domains

Flanking porcentage


H. sapiens

I

Self-interacting

3168.2

20357.3

15.6

II

Non-self-interacting DI

180.5

1882.9

9.6

III

Non-DI

548.8

4386.8

12.5


N. vectensis

I

Self-interacting

1078.2

10354.7

10.4

II

Non-self-interacting DI

110.5

1591.4

6.9

III

Non-DI

187.8

3532.0

5.3


M. brevicollis

I

Self-interacting

272.7

6798.0

4.0

II

Non-self-interacting DI

29.8

951.8

3.1

III

Non-DI

55.6

1946.4

2.9


C. neoformans

I

Self-interacting

98.5

3788.6

2.6

II

Non-self-interacting DI

21.8

690.0

3.2

III

Non-DI

34.8

1537.5

2.3


A. thaliana

I

Self-interacting

232.7

5575.0

4.2

II

Non-self-interacting DI

29.9

813.5

3.7

III

Non-DI

81.6

3760.5

2.2


DI = domain-interacting.

Cancherini et al. BMC Genomics 2010 11(Suppl 5):S11   doi:10.1186/1471-2164-11-S5-S11

Open Data