This article is part of the supplement: Ninth International Conference on Bioinformatics (InCoB2010): Computational Biology

Open Access Proceedings

Discovery and characterization of medaka miRNA genes by next generation sequencing platform

Sung-Chou Li123, Wen-Ching Chan124, Meng-Ru Ho123, Kuo-Wang Tsai3, Ling-Yueh Hu3, Chun-Hung Lai3, Chun-Nan Hsu45, Pung-Pung Hwang6 and Wen-chang Lin13*

Author Affiliations

1 Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan

2 Bioinformatics Program, Taiwan International Graduate Program, Academia Sinica, Taipei, Taiwan

3 Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan

4 Institute of Information Sciences, Academia Sinica, Taipei, Taiwan

5 Information Sciences Institute, University of Southern California, Marina del Rey, CA 90292, USA

6 Institute of Cellular and Organismic Biology, Academia Sinica, Taiwan

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BMC Genomics 2010, 11(Suppl 4):S8  doi:10.1186/1471-2164-11-S4-S8

Published: 2 December 2010

Additional files

Additional file 1:

Candidate miRNAs information of Mh set. Each isomiR of candidate pre-miRNAs was tagged with copy number and p-value.

Format: TXT Size: 127KB Download file

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Additional file 2:

Candidate miRNAs information of Mn set. Each isomiR of candidate pre-miRNAs was tagged with copy number and p-value.

Format: TXT Size: 126KB Download file

Open Data

Additional file 3:

miRNA cluster information.

Format: DOC Size: 253KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data